TaxeseFPS Filing Requirements for Large Taxpayers: Guide to RR No. 9-2001

August 18, 2025
Home » eFPS Filing Requirements for Large Taxpayers: Guide to RR No. 9-2001

The Philippines’ Bureau of Internal Revenue (BIR) introduced the Electronic Filing and Payment System (eFPS) to streamline tax compliance for large taxpayers. With Revenue Regulations No. 9-2001 as its foundation, this system has transformed how businesses file and pay taxes, ensuring efficiency and transparency. Read more to learn about the eFPS system, who is required to use it, its filing requirements, recent regulatory updates, and practical steps for enrollment.

Understanding RR No. 9-2001: The eFPS Foundation

Launched under Revenue Regulations No. 9-2001, the eFPS is a web-based platform required for large taxpayers. It was designed to reduce paperwork, minimize errors, and improve tax compliance. It also allows taxpayers to submit returns and settle tax obligations online via the BIR’s portal or authorized agent banks (AABs). 

Who Must Use eFPS? Large Taxpayer and Other Entities

RR No. 9-2001 mandates eFPS use for large taxpayers, defined by the BIR based on criteria like annual tax payments, gross sales, or industry significance. These include:

  • Businesses that meet the gross sale benchmarks set by the BIR.
  • Entities registered with the Philippine Economic Zone Authority (PEZA) or other special economic zones.
  • Businesses intending to contract with government offices (per Executive Order No. 398 and RR No. 3-2005).
  • Businesses in certain industries with significant tax impact (e.g., banks, insurance companies, utilities).

Large taxpayers must enroll in eFPS and use it exclusively unless the system is unavailable or specific forms are not supported, as clarified by later regulations. Non-compliance with eFPS requirements, such as unauthorized manual filing, is considered a violation and results in penalties.

Taxpayers not required to use the eFPS system must generally file their taxes using eBIRForms instead.

Latest Regulations Supporting eFPS Compliance

Since Revenue Regulations No. 9-2001, multiple regulations have strengthened eFPS usage, most notably Republic Act No. 11976 (Ease of Paying Taxes Act) and its implementing Revenue Regulations No. 4-2024, which enhance efficiency and accessibility for taxpayers.

Enacted in 2024, the EOPT Act mandates electronic filing through eFPS or eBIRForms for most taxpayers, broadening the scope of those required to file electronically.RR No. 4-2024 further streamlines processes by:

  • Introducing a “file and pay anywhere” policy, eliminating the 25% surcharge for wrong venue filing.
  • Allowing electronic submission of attachments via the Electronic Audited Financial Statements (eAFS) or eSubmission Facility.
  • Permitting eFPS users to switch to eBIRForms during system outages, provided they document errors (e.g., screenshots) to avoid penalties.

Revenue Memorandum Circular No. 87-2024 clarifies these rules, ensuring taxpayers understand when manual filing is allowed only during system downtimes, unavailable forms, or with explicit permission from the BIR.

What BIR Forms are Supported by eFPS?

The Electronic Filing and Payment System (eFPS) supports various BIR forms to streamline tax compliance for large taxpayers. These forms include:

  • Income Tax Returns: Forms for individuals and corporations to report annual income tax obligations.
  • Excise Tax Forms: Tax forms levied on specific goods, such as alcohol, tobacco, and petroleum products.
  • VAT Forms: Forms for VAT-registered taxpayers to report monthly or quarterly value-added tax transactions.
  • Withholding Tax Forms: Forms for reporting taxes withheld on payments, including compensation, expanded, and final withholding taxes.
  • Documentary Stamp Tax Forms: Forms for taxes on documents, such as property transfers, loans, and other transactions.
  • Percentage Tax Forms: Forms for non-VAT taxpayers to report percentage taxes based on gross sales or receipts.
  • Payment Forms: Forms for settling taxes not covered by specific filing forms, ensuring proper remittance.

These categories address the core tax obligations of large taxpayers. If a form is unavailable on eFPS, taxpayers may use eBIRForms or manual filing during system downtimes, as permitted under Revenue Regulations No. 4-2024. 

Step-by-Step: Enrolling in the eFPS System

Enrolling in eFPS is straightforward but requires careful adherence to BIR guidelines. Here’s a step-by-step guide for large taxpayers:

  1. Check Eligibility: Confirm if you are a mandated taxpayer required to use eFPS by checking the BIR’s criteria.
  2. Prepare Requirements: Gather necessary documents, including:
    • A letter of intent to use eFPS.
    • Authorization certificates for two company officers.
    • Proof of enrollment with an eFPS-authorized agent bank (AAB).
  3. Access the BIR Website: Navigate to the eFPS enrollment section.
  4. Complete the Enrollment Form: Complete the online eFPS enrollment form with accurate taxpayer details, including your Taxpayer Identification Number (TIN).
  5. Submit Documents: Upload the required documents through the BIR portal or submit them to your Revenue District Office (RDO).
  6. Receive Confirmation: Await BIR approval, typically via email, confirming your eFPS enrollment.
  7. Set Up Payment Channels: Link your eFPS account to an AAB for seamless tax payments.
  8. Test the System: Log in to the eFPS portal, familiarize yourself with the interface, and ensure your system meets technical requirements (e.g., stable internet).

Once enrolled, taxpayers can file returns and pay taxes directly through the eFPS portal, ensuring compliance with RR No. 9-2001 and other regulations.

Final Thoughts

Using the eFPS system, introduced in RR No. 9-2001, is a legal requirement for large taxpayers and other mandated entities in the Philippines. Recent regulations, like the EOPT Act and RR No. 4-2024, have modernized eFPS, making it more user-friendly while addressing challenges like system downtimes. Mandated taxpayers must understand their obligations, enroll promptly, and use the eFPS to stay compliant and avoid penalties. Business Registration Philippines can help you enroll in eFPS and provide expert assistance in filing your BIR forms.

Are You Looking for Assistance Preparing and Filing Your BIR Forms?

Preparing and filing BIR forms correctly can be challenging, especially with regulations frequently changing. From identifying which forms to file and when to ensuring each submission meets compliance standards, the process can quickly become overwhelming. Errors, late filings, or incomplete documentation can lead to penalties or even trigger a BIR audit.

Thankfully, Business Registration Philippines offers professional support for your bookkeepingpayrollauditingtax advisory, and other accounting tasks. Our team specializes in accounting and compliance-related services, ensuring your internal records are thorough and aligned with Philippine regulations.

Contact us today to schedule an initial consultation with our experts.

Contact Us For Assistance

First Name (required)

Last Name (required)

Your Email (required)

Phone (Enter Your Phone Number if You'd Like Us to Call You)

Your Message